Tomoyuki Murano 村野友幸

Software & Data

RFind-sc

Direction-aware mapping of single cells onto biological axes defined by external gene signatures (bioRxiv 2026).

• RFindsc — R package (for Seurat)GitHubZenodo v1.0.1MIT license
• rfindsc — Python package (for AnnData; numerically identical to the R package)GitHubZenodo v1.0.1MIT license
• Analysis code of the RFind-sc paperGitHubZenodo v1.0.2MIT license
• Pseudo-bulk knock-out profiles from the in vivo whole-brain Perturb-seq atlas of Shi et al. (2026)Zenodo datasetCC BY 4.0

REPOPS (repeated optogenetic stimulation)

• Analysis code and processed data for Murano et al., Nature Communications 2026GitHubRaw data (SSBD)

Dentate gyrus population coding

• Raw calcium imaging data for Murano et al., PNAS 2022SSBD repository